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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792777.1_cds_XP_016514377.1_2604
CDS Infomation

[gene=LOC107831137] [db_xref=GeneID:107831137] [protein=galacturonokinase-like isoform X4] [protein_id=XP_016514377.1] [location=join(5671..5709,6780..6893,7907..7950,8342..8495,10645..10710,11022..11101,13062..13161,13588..13811,14184..14224,14312..14340,14689..14758,14851..14940,15259..15503)] [gbkey=CDS]
Sequence

ATGGGTGTTTTTTCTGGTCATTGGCCTTCTGAATCTGAGTTGGATAAATTAAGACAGAAA
GTCGCCGAAATGTCTGGTAGAGATGCTCAAGAGGTCAGGGTGGTTGTATCACCTTACAGG
ATTTGTCCATTGGGCGCTCACATTGATCATCAGGTTACACTACAATCTGGGCAATTTAAA
GGAGAAGTTCGGTTCAGAGTAGATGAAGTTCAGCTTCCTAAGCATATCTCCAAGACAAAT
GGTTTGAATGAACAAATTGACTCATCCAAACCTCAGGAAGAATGCAAATGGGGTAACTAT
GCTAGGGGAGCAATATACGCCCTGCAAAACAAAGGAAATCCTCTGAAAACGGGTATCACT
GGGTTTATCTGTGGTTCTGAGGGTCTTGACAGTTCAGGTCTCAGCTCTTCTGCAGCTGTT
GGTATAGCATATCTGTTGGCTTTCGAAAGTGCAAATGGTCTTGTAGTGTGCCCAACTGAA
AATATTGAATATGATAGGCAGATTGAAAACGAATATTTAGGTTTAAAAAATGGTATATTG
GATCAGTCAGCAATATTGTTATCAAGCTACGGCTGTTTGACCTGCATGAATTGCAAGATT
TCACATTCTGTAGAAAACTCTGACAATTATAGACCGCATGTGCAGACCATAAAACACAAA
CTGATACGCCCTCCAGAGGTGCAAAACAATCATGTCGGAGAGTTAGGTAATGCATACAAG
ATATTGCTGGCCTTTTCAGGTCTGAAACAAGCATTGACAACAAATCCTGGATATAATCGG
CGAGTTGCAGAGTGTCAAGAGGCTGCAAAATTATTGCTGCAAGCTTCAGGGAATGAAGAA
GTGGAACCTGTTCTATCAAACGTTGAACCAGAAGTTTTTGAAGCCCACAAGAGCAAATTA
GAACCCGACCTAGCTAAAAGAGCAGAGCACTATTTCTCTGAAAATGAGAGAGTGCTGAAA
GGACTTGAGGCTTGGGCGTCCGGAAACCTTAAAGAATTTGGAGAGCTTATTACAGCATCT
GGTCTAAGTTCTATTCAAAACTACGAATGTGGTTGTGAACCACTTATACAGCTATATGAG
ATTCTTCTGAAGGCTCCTGGTGTACTTGGGGCACGGTTTAGTGGTGCAGGATTCCGAGGC
TGCTGTCTTGCGTTTGTAGATGCAGATAGAGCAGAAGAAGCCGCAATGTTTGTCAAGAAC
GAGTACTGTAAGCTCCAGCCCGAGTTGGCAAGCCATATCAACCAAGGGCCGGCTGTATTG
ATATGCGATGCAGGTGACTGTGCACGCGTGATCTGA

Peptide Sequence

PEP ID

XP_016514377.1
PEP Infomation

PREDICTED: galacturonokinase-like isoform X4 [Nicotiana tabacum]
Sequence

MGVFSGHWPSESELDKLRQKVAEMSGRDAQEVRVVVSPYRICPLGAHIDHQVTLQSGQFK
GEVRFRVDEVQLPKHISKTNGLNEQIDSSKPQEECKWGNYARGAIYALQNKGNPLKTGIT
GFICGSEGLDSSGLSSSAAVGIAYLLAFESANGLVVCPTENIEYDRQIENEYLGLKNGIL
DQSAILLSSYGCLTCMNCKISHSVENSDNYRPHVQTIKHKLIRPPEVQNNHVGELGNAYK
ILLAFSGLKQALTTNPGYNRRVAECQEAAKLLLQASGNEEVEPVLSNVEPEVFEAHKSKL
EPDLAKRAEHYFSENERVLKGLEAWASGNLKEFGELITASGLSSIQNYECGCEPLIQLYE
ILLKAPGVLGARFSGAGFRGCCLAFVDADRAEEAAMFVKNEYCKLQPELASHINQGPAVL
ICDAGDCARVI

Transcript Sequence

Gene sequence data has not been registered.